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RAB30 RAB30, member RAS oncogene family [ Physeter catodon (sperm whale) ]

Gene ID: 102985654, updated on 10-Mar-2024

Summary

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Gene symbol
RAB30
Gene description
RAB30, member RAS oncogene family
See related
Ensembl:ENSPCTG00005010467
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 16 NC_041229.1 (49927042..50028920)
102 previous assembly ASM283717v2 (GCF_002837175.2) 16 NC_041229.1 (49927038..50028642)

Chromosome 16 - NC_041229.1Genomic Context describing neighboring genes Neighboring gene PCF11 cleavage and polyadenylation factor subunit Neighboring gene uncharacterized LOC102986876 Neighboring gene DNA damage induced apoptosis suppressor Neighboring gene prolylcarboxypeptidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041229.1 Reference ASM283717v5 Primary Assembly

    Range
    49927042..50028920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055078705.1 → XP_054934680.1  ras-related protein Rab-30 isoform X2

    UniProtKB/TrEMBL
    A0A9W2W6D5

  2. XM_028500998.2 → XP_028356799.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  3. XM_055078702.1 → XP_054934677.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04

  4. XM_055078704.1 → XP_054934679.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04

  5. XM_055078703.1 → XP_054934678.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04

  6. XM_024131671.3 → XP_023987439.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04
    Related
    ENSPCTP00005014610.1, ENSPCTT00005016165.1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  7. XM_024131670.3 → XP_023987438.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  8. XM_028501000.2 → XP_028356801.1  ras-related protein Rab-30 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TB04
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

RNA

  1. XR_008615373.1 RNA Sequence

  2. XR_008615372.1 RNA Sequence

  3. XR_008615371.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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