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CABYR calcium binding tyrosine phosphorylation regulated [ Physeter catodon (sperm whale) ]

Gene ID: 102983148, updated on 10-Mar-2024

Summary

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Gene symbol
CABYR
Gene description
calcium binding tyrosine phosphorylation regulated
See related
Ensembl:ENSPCTG00005022352
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 19 NC_041232.1 (38073638..38100331)
102 previous assembly ASM283717v2 (GCF_002837175.2) 19 NC_041232.1 (38079072..38100365)

Chromosome 19 - NC_041232.1Genomic Context describing neighboring genes Neighboring gene laminin subunit alpha 3 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene tetratricopeptide repeat domain 39C Neighboring gene uncharacterized LOC114484449 Neighboring gene oxysterol binding protein like 1A Neighboring gene uncharacterized LOC129391595 Neighboring gene impact RWD domain protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sperm capacitation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm fibrous sheath IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-binding tyrosine phosphorylation-regulated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041232.1 Reference ASM283717v5 Primary Assembly

    Range
    38073638..38100331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055080663.1 → XP_054936638.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SHF6

  2. XM_028480703.2 → XP_028336504.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X2

    UniProtKB/TrEMBL
    A0A455AKV1
    Related
    ENSPCTP00005031444.1, ENSPCTT00005034527.1
    Conserved Domains (3) summary
    cd12100
    Location:10 → 48
    DD_CABYR_SP17; Dimerization/Docking domain of the sperm fibrous sheath proteins, Calcium-Binding tYrosine-phosphorylation Regulated protein and Sperm Protein 17
    PHA03247
    Location:131 → 334
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:132 → 200
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional

  3. XM_028480701.2 → XP_028336502.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SHF6
    Conserved Domains (2) summary
    cd12100
    Location:10 → 48
    DD_CABYR_SP17; Dimerization/Docking domain of the sperm fibrous sheath proteins, Calcium-Binding tYrosine-phosphorylation Regulated protein and Sperm Protein 17
    PRK10811
    Location:133 → 300
    rne; ribonuclease E; Reviewed

  4. XM_055080665.1 → XP_054936640.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SHF6

  5. XM_055080664.1 → XP_054936639.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SHF6

  6. XM_028480702.2 → XP_028336503.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SHF6
    Conserved Domains (2) summary
    cd12100
    Location:10 → 48
    DD_CABYR_SP17; Dimerization/Docking domain of the sperm fibrous sheath proteins, Calcium-Binding tYrosine-phosphorylation Regulated protein and Sperm Protein 17
    PRK10811
    Location:133 → 300
    rne; ribonuclease E; Reviewed

  7. XM_024121012.3 → XP_023976780.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9SHF6
    Conserved Domains (2) summary
    cd12100
    Location:10 → 48
    DD_CABYR_SP17; Dimerization/Docking domain of the sperm fibrous sheath proteins, Calcium-Binding tYrosine-phosphorylation Regulated protein and Sperm Protein 17
    PRK10811
    Location:133 → 300
    rne; ribonuclease E; Reviewed

  8. XM_007127219.3 → XP_007127281.1  calcium-binding tyrosine phosphorylation-regulated protein isoform X3

    See identical proteins and their annotated locations for XP_007127281.1

    UniProtKB/TrEMBL
    A0A2Y9FNA9
    Conserved Domains (1) summary
    PRK14950
    Location:58 → 126
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional
Nucleotide Protein
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