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CDC42EP4 CDC42 effector protein 4 [ Physeter catodon (sperm whale) ]

Gene ID: 102974824, updated on 10-Mar-2024

Summary

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Gene symbol
CDC42EP4
Gene description
CDC42 effector protein 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 14 NC_041227.1 (127792169..127814079)
102 previous assembly ASM283717v2 (GCF_002837175.2) 14 NC_041227.1 (127792201..127814072)

Chromosome 14 - NC_041227.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal intermediate chain 2 Neighboring gene sidekick cell adhesion molecule 2 Neighboring gene mth938 domain-containing protein-like Neighboring gene cleavage and polyadenylation specific factor 4 like Neighboring gene mitochondrial nucleoid associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cdc42 effector protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041227.1 Reference ASM283717v5 Primary Assembly

    Range
    127792169..127814079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024129993.3 → XP_023985761.1  cdc42 effector protein 4

    UniProtKB/TrEMBL
    A0A2Y9T465
    Conserved Domains (2) summary
    pfam14957
    Location:113 → 222
    BORG_CEP; Cdc42 effector
    pfam00786
    Location:26 → 67
    PBD; P21-Rho-binding domain

  2. XM_028499644.2 → XP_028355445.1  cdc42 effector protein 4

    UniProtKB/TrEMBL
    A0A2Y9T465
    Conserved Domains (2) summary
    pfam14957
    Location:113 → 222
    BORG_CEP; Cdc42 effector
    pfam00786
    Location:26 → 67
    PBD; P21-Rho-binding domain

  3. XM_028499645.2 → XP_028355446.1  cdc42 effector protein 4

    UniProtKB/TrEMBL
    A0A2Y9T465
    Conserved Domains (2) summary
    pfam14957
    Location:113 → 222
    BORG_CEP; Cdc42 effector
    pfam00786
    Location:26 → 67
    PBD; P21-Rho-binding domain

  4. XM_028499643.2 → XP_028355444.1  cdc42 effector protein 4

    UniProtKB/TrEMBL
    A0A2Y9T465
    Conserved Domains (2) summary
    pfam14957
    Location:113 → 222
    BORG_CEP; Cdc42 effector
    pfam00786
    Location:26 → 67
    PBD; P21-Rho-binding domain
Nucleotide Protein
Heading Accession and Version

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