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PCTP phosphatidylcholine transfer protein [ Panthera tigris (tiger) ]

Gene ID: 102972581, updated on 10-Mar-2024

Summary

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Gene symbol
PCTP
Gene description
phosphatidylcholine transfer protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See PCTP in Genome Data Viewer
Location:
chromosome: E1
Exon count:
8
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E1 NC_056673.1 (30484543..30517264, complement)

Chromosome E1 - NC_056673.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and fibronectin type III domain containing 1 Neighboring gene uncharacterized LOC122233571 Neighboring gene uncharacterized LOC122233570 Neighboring gene uncharacterized LOC122233696 Neighboring gene transmembrane protein 100 Neighboring gene transfer RNA glutamine (anticodon CUG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056673.1 Chromosome E1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056673.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    30484543..30517264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042967221.1 → XP_042823155.1  phosphatidylcholine transfer protein isoform X3

    UniProtKB/TrEMBL
    A0A8C9K7W9
    Conserved Domains (1) summary
    cl14643
    Location:1 → 138
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily

  2. XM_042967219.1 → XP_042823153.1  phosphatidylcholine transfer protein isoform X2

    Conserved Domains (1) summary
    cd08910
    Location:5 → 210
    START_STARD2-like; Lipid-binding START domain of mammalian STARD2 and related proteins

  3. XM_007086700.2 → XP_007086762.1  phosphatidylcholine transfer protein isoform X1

    Conserved Domains (1) summary
    cd08910
    Location:5 → 211
    START_STARD2-like; Lipid-binding START domain of mammalian STARD2 and related proteins

  4. XM_042967220.1 → XP_042823154.1  phosphatidylcholine transfer protein isoform X3

    UniProtKB/TrEMBL
    A0A8C9K7W9
    Conserved Domains (1) summary
    cl14643
    Location:1 → 138
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
Heading Accession and Version

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