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ZNF180 zinc finger protein 180 [ Panthera tigris (tiger) ]

Gene ID: 102949017, updated on 10-Mar-2024

Summary

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Gene symbol
ZNF180
Gene description
zinc finger protein 180
See related
Ensembl:ENSPTIG00000007232
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E2 NC_056674.1 (12058418..12076681)

Chromosome E2 - NC_056674.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily member 23 Neighboring gene CEA cell adhesion molecule 20 Neighboring gene zinc finger protein 229 Neighboring gene uncharacterized LOC107180060 Neighboring gene zinc finger protein 112

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056674.1 Chromosome E2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 180

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056674.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    12058418..12076681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042970718.1 → XP_042826652.1  zinc finger protein 180

    Conserved Domains (3) summary
    cd07765
    Location:71 → 108
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:324 → 685
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:351 → 371
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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