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ATAD5 ATPase family AAA domain containing 5 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102946982, updated on 10-Mar-2024

Summary

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Gene symbol
ATAD5
Gene description
ATPase family AAA domain containing 5
Locus tag
UY3_02593
See related
EnsemblRapid:ENSCMYG00015020869
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
25
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 14 NC_051254.2 (9219014..9247635, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 12 NC_051252.1 (9218883..9247332, complement)

Chromosome 14 - NC_051254.2Genomic Context describing neighboring genes Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene transcription elongation factor, mitochondrial Neighboring gene cytokine receptor like factor 3 Neighboring gene SUZ12 polycomb repressive complex 2 subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp unloader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATPase family AAA domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051254.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    9219014..9247635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043528543.1 → XP_043384478.1  ATPase family AAA domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    M7BQJ7
    Conserved Domains (2) summary
    PRK04195
    Location:915 → 1034
    PRK04195; replication factor C large subunit; Provisional
    PTZ00108
    Location:421 → 655
    PTZ00108; DNA topoisomerase 2-like protein; Provisional

  2. XM_043528544.1 → XP_043384479.1  ATPase family AAA domain-containing protein 5 isoform X4

    UniProtKB/TrEMBL
    M7BQJ7
    Conserved Domains (2) summary
    PRK04195
    Location:814 → 933
    PRK04195; replication factor C large subunit; Provisional
    PTZ00108
    Location:284 → 655
    PTZ00108; DNA topoisomerase 2-like protein; Provisional

  3. XM_027817493.3 → XP_027673294.2  ATPase family AAA domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    M7BQJ7
    Related
    ENSCMYP00015031808.1, ENSCMYT00015039226.1
    Conserved Domains (2) summary
    PRK04195
    Location:959 → 1078
    PRK04195; replication factor C large subunit; Provisional
    PTZ00108
    Location:429 → 800
    PTZ00108; DNA topoisomerase 2-like protein; Provisional

  4. XM_027817491.3 → XP_027673292.2  ATPase family AAA domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    M7BQJ7
    Related
    ENSCMYP00015031813.1, ENSCMYT00015039231.1
    Conserved Domains (2) summary
    PRK04195
    Location:1060 → 1179
    PRK04195; replication factor C large subunit; Provisional
    PTZ00108
    Location:566 → 800
    PTZ00108; DNA topoisomerase 2-like protein; Provisional

  5. XM_043528541.1 → XP_043384476.1  ATPase family AAA domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    M7BQJ7
    Conserved Domains (2) summary
    PRK04195
    Location:915 → 1034
    PRK04195; replication factor C large subunit; Provisional
    PTZ00108
    Location:421 → 655
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
Nucleotide Protein
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