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Znf8 zinc finger protein 8 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102921731, updated on 10-Mar-2024

Summary

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Gene symbol
Znf8
Gene description
zinc finger protein 8
See related
Ensembl:ENSPEMG00000007396
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 1 NC_056008.1 (23444366..23458042, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006502295.1 (250050..263094, complement)

Chromosome 1 - NC_056008.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S5 Neighboring gene zinc finger and SCAN domain containing 22 Neighboring gene zinc finger protein 329 Neighboring gene zinc finger protein 274 Neighboring gene coiled-coil domain-containing protein 126

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056008.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    23444366..23458042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006997205.3 → XP_006997267.1  zinc finger protein 8

    UniProtKB/TrEMBL
    A0A6I9MLM9
    Related
    ENSPEMP00000004959.1
    Conserved Domains (6) summary
    smart00349
    Location:25 → 85
    KRAB; krueppel associated box
    COG5048
    Location:205 → 404
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:259 → 279
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:467 → 489
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:25 → 64
    KRAB; KRAB box
    pfam13465
    Location:271 → 296
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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