U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Trmt10a tRNA methyltransferase 10A [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102918918, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Trmt10a
Gene description
tRNA methyltransferase 10A
See related
Ensembl:ENSPEMG00000011113
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 6 NC_056013.1 (113013948..113027549)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501040.1 (5497914..5512196, complement)

Chromosome 6 - NC_056013.1Genomic Context describing neighboring genes Neighboring gene chromosome 6 C4orf54 homolog Neighboring gene microsomal triglyceride transfer protein Neighboring gene chromosome 6 C4orf17 homolog Neighboring gene alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N1-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tRNA methyltransferase 10 homolog A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056013.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    113013948..113027549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006970324.3 → XP_006970386.1  tRNA methyltransferase 10 homolog A isoform X3

    UniProtKB/TrEMBL
    A0A6I9KYV3, A0A8C8TDS8
    Related
    ENSPEMP00000009995.1
    Conserved Domains (1) summary
    cl00407
    Location:111 → 276
    tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

  2. XM_042279992.1 → XP_042135926.1  tRNA methyltransferase 10 homolog A isoform X1

    UniProtKB/TrEMBL
    A0A8C8TDS8
    Conserved Domains (1) summary
    cd18101
    Location:115 → 290
    Trm10euk_A; eukaryotic tRNA m1G9 methyltransferase Trm10 homolog A

  3. XM_042279993.1 → XP_042135927.1  tRNA methyltransferase 10 homolog A isoform X2

    UniProtKB/TrEMBL
    A0A8C8TDS8
    Conserved Domains (1) summary
    cd18101
    Location:109 → 284
    Trm10euk_A; eukaryotic tRNA m1G9 methyltransferase Trm10 homolog A

  4. XM_015992422.2 → XP_015847908.1  tRNA methyltransferase 10 homolog A isoform X3

    UniProtKB/TrEMBL
    A0A6I9KYV3, A0A8C8TDS8
    Conserved Domains (1) summary
    cl00407
    Location:111 → 276
    tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

  5. XM_015992428.2 → XP_015847914.1  tRNA methyltransferase 10 homolog A isoform X3

    UniProtKB/TrEMBL
    A0A6I9KYV3, A0A8C8TDS8
    Related
    ENSPEMP00000010002.1
    Conserved Domains (1) summary
    cl00407
    Location:111 → 276
    tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.