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Tmed5 transmembrane p24 trafficking protein 5 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102909831, updated on 10-Mar-2024

Summary

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Gene symbol
Tmed5
Gene description
transmembrane p24 trafficking protein 5
See related
Ensembl:ENSPEMG00000021997
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 10 NC_056017.1 (97933777..97949511, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501309.1 (756067..769169)

Chromosome 10 - NC_056017.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121820999 Neighboring gene metal response element binding transcription factor 2 Neighboring gene coiled-coil domain containing 18 Neighboring gene synaptic vesicle glycoprotein 2A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 5
Names
transmembrane emp24 protein transport domain containing 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056017.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    97933777..97949511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006985816.3 → XP_006985878.1  transmembrane emp24 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A6I9LWG4
    Related
    ENSPEMP00000025622.1
    Conserved Domains (1) summary
    pfam01105
    Location:35 → 222
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. XM_006985817.3 → XP_006985879.1  transmembrane emp24 domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A6I9LNN1
    Conserved Domains (1) summary
    pfam01105
    Location:35 → 156
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
Heading Accession and Version

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