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GPATCH4 G-patch domain containing 4 [ Pteropus alecto (black flying fox) ]

Gene ID: 102894859, updated on 30-Mar-2024

Summary

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Gene symbol
GPATCH4
Gene description
G-patch domain containing 4
Locus tag
PAL_GLEAN10005331
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006443131.1 (1092095..1098136)

NW_006443131.1Genomic Context describing neighboring genes Neighboring gene brevican Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene 5S ribosomal RNA Neighboring gene NAD(P)HX epimerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006443131 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G patch domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006443131.1 Reference ASM32557v1 Primary Assembly

    Range
    1092095..1098136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015598379.2 → XP_015453865.1  G patch domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    L5JTH3
    Conserved Domains (2) summary
    pfam01585
    Location:8 → 55
    G-patch; G-patch domain
    cl27511
    Location:168 → 390
    Na_Ca_ex; Sodium/calcium exchanger protein

  2. XM_025040903.1 → XP_024896671.1  G patch domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    L5JTH3
    Conserved Domains (2) summary
    pfam01585
    Location:8 → 55
    G-patch; G-patch domain
    cl27511
    Location:168 → 390
    Na_Ca_ex; Sodium/calcium exchanger protein

  3. XM_025040906.1 → XP_024896674.1  G patch domain-containing protein 4 isoform X2

    Conserved Domains (2) summary
    pfam01585
    Location:8 → 55
    G-patch; G-patch domain
    cl27511
    Location:167 → 389
    Na_Ca_ex; Sodium/calcium exchanger protein

  4. XM_025040904.1 → XP_024896672.1  G patch domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    L5JTH3
    Conserved Domains (2) summary
    pfam01585
    Location:8 → 55
    G-patch; G-patch domain
    cl27511
    Location:168 → 390
    Na_Ca_ex; Sodium/calcium exchanger protein
Nucleotide Protein
Heading Accession and Version

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