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NPTX1 neuronal pentraxin 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102892593, updated on 30-Mar-2024

Summary

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Gene symbol
NPTX1
Gene description
neuronal pentraxin 1
Locus tag
PAL_GLEAN10014574
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See NPTX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006436283.1 (1622054..1639091)

NW_006436283.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 6 Neighboring gene regulatory associated protein of MTOR complex 1 Neighboring gene 5S ribosomal RNA Neighboring gene endonuclease V Neighboring gene ring finger protein 213 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006436283 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axonogenesis involved in innervation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal pentraxin-1
Names
Neuronal pentraxin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006436283.1 Reference ASM32557v1 Primary Assembly

    Range
    1622054..1639091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006912370.2 → XP_006912432.1  neuronal pentraxin-1

    Conserved Domains (1) summary
    smart00159
    Location:256 → 462
    PTX; Pentraxin / C-reactive protein / pentaxin family
Nucleotide Protein
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