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DBP D-box binding PAR bZIP transcription factor [ Pteropus alecto (black flying fox) ]

Gene ID: 102887043, updated on 30-Mar-2024

Summary

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Gene symbol
DBP
Gene description
D-box binding PAR bZIP transcription factor
Locus tag
PAL_GLEAN10004590
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See DBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006430464.1 (2019481..2025329)

NW_006430464.1Genomic Context describing neighboring genes Neighboring gene netrin 5 Neighboring gene carbonic anhydrase 11 Neighboring gene sphingosine kinase 2 Neighboring gene ribosomal protein L18

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006430464 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D site-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006430464.1 Reference ASM32557v1 Primary Assembly

    Range
    2019481..2025329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006905057.3 → XP_006905119.1  D site-binding protein isoform X1

    See identical proteins and their annotated locations for XP_006905119.1

    UniProtKB/TrEMBL
    L5L4L0
    Conserved Domains (1) summary
    cd14695
    Location:117 → 176
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain

  2. XM_025048600.1 → XP_024904368.1  D site-binding protein isoform X2

    Conserved Domains (1) summary
    cd14695
    Location:111 → 170
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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