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FTO FTO alpha-ketoglutarate dependent dioxygenase [ Pteropus alecto (black flying fox) ]

Gene ID: 102882796, updated on 11-Apr-2024

Summary

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Gene symbol
FTO
Gene description
FTO alpha-ketoglutarate dependent dioxygenase
Locus tag
PAL_GLEAN10011032
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006433950.1 (4910422..5241645)

NW_006433950.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene RPGRIP1 like Neighboring gene 5S ribosomal RNA Neighboring gene vegetative cell wall protein gp1-like Neighboring gene iroquois homeobox 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006433950 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables broad specificity oxidative DNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA N6-methyladenosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA alkylation repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in RNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-ketoglutarate-dependent dioxygenase FTO
Names
Protein fto

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006433950.1 Reference ASM32557v1 Primary Assembly

    Range
    4910422..5241645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015586964.2 → XP_015442450.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X2

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:36 → 324
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:328 → 534
    FTO_CTD; FTO C-terminal domain

  2. XM_025044569.1 → XP_024900337.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X4

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 495
    FTO_CTD; FTO C-terminal domain

  3. XM_025044570.1 → XP_024900338.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X5

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 454
    FTO_CTD; FTO C-terminal domain

  4. XM_025044571.1 → XP_024900339.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X6

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 455
    FTO_CTD; FTO C-terminal domain

  5. XM_025044572.1 → XP_024900340.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X7

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 455
    FTO_CTD; FTO C-terminal domain

  6. XM_025044567.1 → XP_024900335.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X1

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 535
    FTO_CTD; FTO C-terminal domain

  7. XM_025044573.1 → XP_024900341.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X8

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 427
    FTO_CTD; FTO C-terminal domain

  8. XM_025044568.1 → XP_024900336.1  alpha-ketoglutarate-dependent dioxygenase FTO isoform X3

    UniProtKB/TrEMBL
    L5KWP6
    Conserved Domains (2) summary
    pfam12933
    Location:37 → 325
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:329 → 498
    FTO_CTD; FTO C-terminal domain
Nucleotide Protein
Heading Accession and Version

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