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HABP4 hyaluronan binding protein 4 [ Pteropus alecto (black flying fox) ]

Gene ID: 102880874, updated on 30-Mar-2024

Summary

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Gene symbol
HABP4
Gene description
hyaluronan binding protein 4
Locus tag
PAL_GLEAN10003685
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006441525.1 (298680..328429, complement)

NW_006441525.1Genomic Context describing neighboring genes Neighboring gene peroxiredoxin like 2C Neighboring gene cell division cycle 14B Neighboring gene zinc finger protein 367 Neighboring gene solute carrier family 35 member D2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006441525 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intracellular hyaluronan-binding protein 4
Names
Intracellular hyaluronan-binding protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006441525.1 Reference ASM32557v1 Primary Assembly

    Range
    298680..328429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025051675.1 → XP_024907443.1  intracellular hyaluronan-binding protein 4 isoform X5

    Conserved Domains (2) summary
    pfam04774
    Location:176 → 259
    HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
    pfam16174
    Location:18 → 180
    IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal

  2. XM_025051674.1 → XP_024907442.1  intracellular hyaluronan-binding protein 4 isoform X4

    Conserved Domains (2) summary
    pfam04774
    Location:213 → 300
    HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
    pfam16174
    Location:18 → 180
    IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal

  3. XM_025051673.1 → XP_024907441.1  intracellular hyaluronan-binding protein 4 isoform X3

    Conserved Domains (2) summary
    pfam04774
    Location:233 → 313
    HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
    pfam16174
    Location:18 → 180
    IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal

  4. XM_025051672.1 → XP_024907440.1  intracellular hyaluronan-binding protein 4 isoform X1

    Conserved Domains (2) summary
    pfam04774
    Location:233 → 336
    HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
    pfam16174
    Location:18 → 180
    IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal

  5. XM_006918810.3 → XP_006918872.1  intracellular hyaluronan-binding protein 4 isoform X2

    See identical proteins and their annotated locations for XP_006918872.1

    UniProtKB/TrEMBL
    L5K5N3
    Conserved Domains (2) summary
    pfam04774
    Location:217 → 321
    HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
    pfam16174
    Location:18 → 136
    IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal
Nucleotide Protein
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