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RAD18 RAD18 E3 ubiquitin protein ligase [ Pteropus alecto (black flying fox) ]

Gene ID: 102879933, updated on 30-Mar-2024

Summary

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Gene symbol
RAD18
Gene description
RAD18 E3 ubiquitin protein ligase
Locus tag
PAL_GLEAN10022251
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See RAD18 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006440638.1 (28640505..28739228, complement)

NW_006440638.1Genomic Context describing neighboring genes Neighboring gene oxytocin receptor Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene SLIT-ROBO Rho GTPase activating protein 3 Neighboring gene 5S ribosomal RNA Neighboring gene MARCKS-related protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006440638 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in postreplication repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein monoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rad6-Rad18 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RAD18
Names
RAD18 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006440638.1 Reference ASM32557v1 Primary Assembly

    Range
    28640505..28739228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025050749.1 → XP_024906517.1  E3 ubiquitin-protein ligase RAD18 isoform X2

    UniProtKB/TrEMBL
    L5K911
    Conserved Domains (1) summary
    cl28410
    Location:13 → 363
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]

  2. XM_006917575.3 → XP_006917637.1  E3 ubiquitin-protein ligase RAD18 isoform X1

    UniProtKB/TrEMBL
    L5K911
    Conserved Domains (4) summary
    smart00734
    Location:201 → 224
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd00162
    Location:25 → 63
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    TIGR00599
    Location:13 → 363
    rad18; DNA repair protein rad18
    pfam02037
    Location:248 → 282
    SAP; SAP domain
Nucleotide Protein
Heading Accession and Version

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