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HIP1 huntingtin interacting protein 1 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102865015, updated on 10-Mar-2024

Summary

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Gene symbol
HIP1
Gene description
huntingtin interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399830.1 (12090249..12243324, complement)

NW_006399830.1Genomic Context describing neighboring genes Neighboring gene POM121 transmembrane nucleoporin C Neighboring gene NOP2/Sun RNA methyltransferase 5 Neighboring gene C-C motif chemokine ligand 24 Neighboring gene rhomboid domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399830 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,4-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in clathrin coat assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
huntingtin-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399830.1 Reference EleEdw1.0

    Range
    12090249..12243324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006889689.1 → XP_006889751.1  huntingtin-interacting protein 1

    Conserved Domains (6) summary
    smart00307
    Location:814 → 1012
    ILWEQ; I/LWEQ domain
    COG3599
    Location:366 → 562
    DivIVA; Cell division septum initiation DivIVA, interacts with FtsZ, MinD and other proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam07651
    Location:37 → 308
    ANTH; ANTH domain
    pfam14335
    Location:336 → 442
    DUF4391; Domain of unknown function (DUF4391)
    pfam16515
    Location:482 → 580
    HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1
    cl23720
    Location:390 → 493
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

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