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GTF2E1 general transcription factor IIE subunit 1 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102864826, updated on 10-Mar-2024

Summary

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Gene symbol
GTF2E1
Gene description
general transcription factor IIE subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399782.1 (10737890..10784228, complement)

NW_006399782.1Genomic Context describing neighboring genes Neighboring gene syntaxin binding protein 5L Neighboring gene ferritin light chain-like Neighboring gene RAB, member of RAS oncogene family like 3 Neighboring gene homogentisate 1,2-dioxygenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399782 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription open complex formation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIE subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399782.1 Reference EleEdw1.0

    Range
    10737890..10784228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006884248.1 → XP_006884310.1  general transcription factor IIE subunit 1

    Conserved Domains (4) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam02002
    Location:16 → 123
    TFIIE_alpha; TFIIE alpha subunit
    pfam08271
    Location:127 → 174
    TF_Zn_Ribbon; TFIIB zinc-binding
    pfam11521
    Location:393 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha
Nucleotide Protein
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