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ZBTB47 zinc finger and BTB domain containing 47 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102844370, updated on 10-Mar-2024

Summary

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Gene symbol
ZBTB47
Gene description
zinc finger and BTB domain containing 47
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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See ZBTB47 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399871.1 (7544541..7550958, complement)

NW_006399871.1Genomic Context describing neighboring genes Neighboring gene hedgehog acyltransferase like Neighboring gene kelch like family member 40 Neighboring gene natural killer cell triggering receptor Neighboring gene dnaJ homolog subfamily C member 17-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399871 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 652

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399871.1 Reference EleEdw1.0

    Range
    7544541..7550958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006892985.1 → XP_006893047.1  zinc finger protein 652

    Conserved Domains (6) summary
    smart00225
    Location:18 → 113
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:630 → 708
    COG5048; FOG: Zn-finger [General function prediction only]
    TIGR04104
    Location:577 → 621
    cxxc_20_cxxc; cxxc_20_cxxc protein
    sd00017
    Location:578 → 598
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:4 → 110
    BTB; BTB/POZ domain
    pfam13465
    Location:646 → 669
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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