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chst3a carbohydrate (chondroitin 6) sulfotransferase 3a [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102697289, updated on 10-Mar-2024

Summary

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Gene symbol
chst3a
Gene description
carbohydrate (chondroitin 6) sulfotransferase 3a
See related
Ensembl:ENSLOCG00000005518
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Also known as
chst3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
3
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG5 NC_023183.1 (7892257..7910056, complement)

Linkage Group LG5 - NC_023183.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine-rich repeat protein 15 Neighboring gene CUE domain containing 2 Neighboring gene paired box 2a Neighboring gene uncharacterized LOC107077293 Neighboring gene growth hormone inducible transmembrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023183.1 Chromosome LG5 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023183.1 Reference LepOcu1 Primary Assembly

    Range
    7892257..7910056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006630355.2 → XP_006630418.2  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    W5ME53, W5ME72
    Related
    ENSLOCP00000006681.1, ENSLOCT00000006689.1
    Conserved Domains (1) summary
    cl21551
    Location:226 → 414
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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