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id4 inhibitor of DNA binding 4 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102685672, updated on 10-Mar-2024

Summary

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Gene symbol
id4
Gene description
inhibitor of DNA binding 4
See related
Ensembl:ENSLOCG00000009639
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG11
Exon count:
3
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG11 NC_023189.1 (32525684..32528424)

Linkage Group LG11 - NC_023189.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107078707 Neighboring gene uncharacterized LOC107078708 Neighboring gene uncharacterized LOC107078663 Neighboring gene neurocalcin delta b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023189.1 Chromosome LG11 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein inhibitor ID-4
Names
inhibitor of DNA binding 4, HLH protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023189.1 Reference LepOcu1 Primary Assembly

    Range
    32525684..32528424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006635970.2 → XP_006636033.1  DNA-binding protein inhibitor ID-4

    UniProtKB/TrEMBL
    W5MTS0
    Related
    ENSLOCP00000011779.1, ENSLOCT00000011797.1
    Conserved Domains (1) summary
    cd00083
    Location:48 → 90
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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