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impact impact RWD domain protein [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102685536, updated on 10-Mar-2024

Summary

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Gene symbol
impact
Gene description
impact RWD domain protein
See related
Ensembl:ENSLOCG00000006429
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG9
Exon count:
12
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG9 NC_023187.1 (13113525..13182651, complement)

Linkage Group LG9 - NC_023187.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 521 Neighboring gene uncharacterized LOC107078150 Neighboring gene histamine receptor H4 Neighboring gene uncharacterized LOC107078153 Neighboring gene oxysterol binding protein-like 1A Neighboring gene uncharacterized LOC107078152

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023187.1 Chromosome LG9 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein IMPACT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023187.1 Reference LepOcu1 Primary Assembly

    Range
    13113525..13182651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015353850.1 → XP_015209336.1  protein IMPACT isoform X2

    UniProtKB/TrEMBL
    W5MHC6
    Conserved Domains (2) summary
    smart00591
    Location:18 → 118
    RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
    pfam01205
    Location:185 → 292
    UPF0029; Uncharacterized protein family UPF0029

  2. XM_015353851.1 → XP_015209337.1  protein IMPACT isoform X3

    UniProtKB/TrEMBL
    W5MHA9, W5MHC6
    Related
    ENSLOCP00000007768.1, ENSLOCT00000007777.1
    Conserved Domains (2) summary
    smart00591
    Location:18 → 118
    RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
    pfam01205
    Location:186 → 293
    UPF0029; Uncharacterized protein family UPF0029

  3. XM_015353849.1 → XP_015209335.1  protein IMPACT isoform X1

    UniProtKB/TrEMBL
    W5MHC6
    Conserved Domains (2) summary
    smart00591
    Location:18 → 118
    RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
    pfam01205
    Location:186 → 293
    UPF0029; Uncharacterized protein family UPF0029
Nucleotide Protein
Heading Accession and Version

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