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tes testis derived transcript (3 LIM domains) [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102685131, updated on 10-Mar-2024

Summary

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Gene symbol
tes
Gene description
testis derived transcript (3 LIM domains)
See related
Ensembl:ENSLOCG00000015603
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
7
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG8 NC_023186.1 (11235162..11247469, complement)

Linkage Group LG8 - NC_023186.1Genomic Context describing neighboring genes Neighboring gene caveolin 1 Neighboring gene caveolin 2 Neighboring gene carboxypeptidase A1-like Neighboring gene carboxypeptidase A1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023186.1 Chromosome LG8 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
testin
Names
testin LIM domain protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023186.1 Reference LepOcu1 Primary Assembly

    Range
    11235162..11247469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006633271.2 → XP_006633334.1  testin

    UniProtKB/TrEMBL
    W5NF00
    Related
    ENSLOCP00000019209.1, ENSLOCT00000019241.1
    Conserved Domains (4) summary
    cd09413
    Location:236 → 293
    LIM1_Testin; The first LIM domain of Testin
    cd09416
    Location:299 → 354
    LIM2_Testin; The second LIM domain of Testin
    cd09419
    Location:361 → 419
    LIM3_Testin; The third LIM domain of Testin
    cd09829
    Location:109 → 195
    PET_testin; The PET domain of Testin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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