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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_015641.4 → NP_056456.1 testin isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform.
- Source sequence(s)
-
AF245356, DC341259
- Consensus CDS
-
CCDS5763.1
- UniProtKB/Swiss-Prot
- A4D0U6, Q9GZQ1, Q9HAJ9, Q9UGI8
- UniProtKB/TrEMBL
- A4D0U5, B2RDR4
- Related
- ENSP00000350937.4, ENST00000358204.9
- Conserved Domains (4) summary
-
- cd09413
Location:236 → 293
- LIM1_Testin; The first LIM domain of Testin
- cd09416
Location:299 → 354
- LIM2_Testin; The second LIM domain of Testin
- cd09419
Location:361 → 419
- LIM3_Testin; The third LIM domain of Testin
- cd09829
Location:109 → 196
- PET_testin; The PET domain of Testin
-
NM_152829.3 → NP_690042.1 testin isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate in-frame exon in the 5' UTR and uses a downstream start codon, compared to variant 1. Thus isoform 2 is nine amino acids shorter than isoform 1.
- Source sequence(s)
-
AF245357, AK310995
- Consensus CDS
-
CCDS5764.1
- UniProtKB/TrEMBL
-
B2RDR4
- Related
- ENSP00000377121.2, ENST00000393481.6
- Conserved Domains (4) summary
-
- cd09413
Location:227 → 284
- LIM1_Testin; The first LIM domain of Testin
- cd09416
Location:290 → 345
- LIM2_Testin; The second LIM domain of Testin
- cd09419
Location:352 → 410
- LIM3_Testin; The third LIM domain of Testin
- cd09829
Location:100 → 187
- PET_testin; The PET domain of Testin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
116210539..116258783
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
117525529..117573770
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)