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PLPPR4 phospholipid phosphatase related 4 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102574233, updated on 8-May-2024

Summary

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Gene symbol
PLPPR4
Gene description
phospholipid phosphatase related 4
Locus tag
Y1Q_0007484
See related
EnsemblRapid:ENSAMIG00015024725
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (37109625..37192359)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713998.1 (1261189..1332561, complement)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 7 Neighboring gene phospholipid phosphatase related 5 Neighboring gene putative ferric-chelate reductase 1 Neighboring gene palmdelphin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase-related protein type 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    37109625..37192359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006273570.3 → XP_006273632.1  phospholipid phosphatase-related protein type 4

    Related
    ENSAMIP00015034299.1, ENSAMIT00015046878.1
    Conserved Domains (1) summary
    cd03384
    Location:126 → 275
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Nucleotide Protein
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