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HERPUD2 HERPUD family member 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571238, updated on 8-May-2024

Summary

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Gene symbol
HERPUD2
Gene description
HERPUD family member 2
Locus tag
Y1Q_0017546
See related
EnsemblRapid:ENSAMIG00015019284
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (127790305..127823106)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017708624.1 (20574808..20607604)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene endonuclease/exonuclease/phosphatase family domain containing 1 Neighboring gene septin 7 Neighboring gene uncharacterized LOC109282205 Neighboring gene uncharacterized LOC132250875

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    127790305..127823106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006261725.4 → XP_006261787.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein

    UniProtKB/TrEMBL
    A0A151P2Q0
    Related
    ENSAMIP00015026286.1, ENSAMIT00015036577.1
    Conserved Domains (2) summary
    cd01790
    Location:4 → 82
    Herp_N; Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain protein
    smart00213
    Location:5 → 82
    UBQ; Ubiquitin homologues
Nucleotide Protein
Heading Accession and Version

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