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SDHD succinate dehydrogenase complex subunit D [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571129, updated on 26-Jun-2024

Summary

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Gene symbol
SDHD
Gene description
succinate dehydrogenase complex subunit D
Locus tag
Y1Q_0010145
See related
EnsemblRapid:ENSAMIG00015004124
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 16 NC_081839.1 (31789387..31800279)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710534.1 (956974..967750, complement)

Chromosome 16 - NC_081839.1Genomic Context describing neighboring genes Neighboring gene NKAP domain containing 1 Neighboring gene translocase of inner mitochondrial membrane 8 homolog B Neighboring gene interleukin 18 Neighboring gene uncharacterized LOC109283775

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081839.1 Reference rAllMis1 Primary Assembly

    Range
    31789387..31800279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014600842.3 → XP_014456328.1  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

    UniProtKB/TrEMBL
    A0A151NG23
    Related
    ENSAMIP00015004945.1, ENSAMIT00015007438.1
    Conserved Domains (1) summary
    cl00881
    Location:67 → 162
    SQR_QFR_TM; Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, transmembrane subunits; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol, while QFR catalyzes the reverse reaction. SQR, ...
Nucleotide Protein
Heading Accession and Version

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