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CMC2 C-X9-C motif containing 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102567664, updated on 10-Mar-2024

Summary

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Gene symbol
CMC2
Gene description
C-X9-C motif containing 2
Locus tag
Y1Q_0010308
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 10 NC_081833.1 (69886615..69920153, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709980.1 (4314910..4348273, complement)

Chromosome 10 - NC_081833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109283357 Neighboring gene uncharacterized LOC132243610 Neighboring gene dynein light chain roadblock-type 2 Neighboring gene chromodomain Y like 2 Neighboring gene chromosome 10 C16orf46 homolog Neighboring gene centromere protein N Neighboring gene ATM interactor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COX assembly mitochondrial protein 2 homolog
Names
COX assembly mitochondrial 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081833.1 Reference rAllMis1 Primary Assembly

    Range
    69886615..69920153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059713896.1 → XP_059569879.1  COX assembly mitochondrial protein 2 homolog isoform X1

  2. XM_014609247.3 → XP_014464733.1  COX assembly mitochondrial protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A151NM45
    Conserved Domains (1) summary
    pfam08583
    Location:1 → 69
    Cmc1; Cytochrome c oxidase biogenesis protein Cmc1 like
Nucleotide Protein
Heading Accession and Version

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