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HSD17B1 hydroxysteroid 17-beta dehydrogenase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102564718, updated on 19-Jun-2024

Summary

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Gene symbol
HSD17B1
Gene description
hydroxysteroid 17-beta dehydrogenase 1
Locus tag
Y1Q_0008599
See related
EnsemblRapid:ENSAMIG00015022667
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (170202341..170206884, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711096.1 (124004..128640, complement)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene endothelial zinc finger protein induced by tumor necrosis factor alpha Neighboring gene coenzyme Q-binding protein COQ10 homolog B, mitochondrial Neighboring gene Coenzyme A synthase Neighboring gene N-acetyl-alpha-glucosaminidase Neighboring gene serine/threonine-protein kinase 17A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estradiol 17-beta-dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in estrogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
17-beta-hydroxysteroid dehydrogenase type 1
Names
estradiol 17-beta-dehydrogenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    170202341..170206884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014594178.3 → XP_014449664.1  17-beta-hydroxysteroid dehydrogenase type 1 isoform X2

    Related
    ENSAMIP00015031285.1, ENSAMIT00015043031.1
    Conserved Domains (2) summary
    pfam00106
    Location:5 → 189
    adh_short; short chain dehydrogenase
    cl21454
    Location:4 → 257
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_006260401.4 → XP_006260463.1  17-beta-hydroxysteroid dehydrogenase type 1 isoform X3

    Conserved Domains (2) summary
    pfam00106
    Location:5 → 135
    adh_short; short chain dehydrogenase
    cl21454
    Location:4 → 206
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  3. XM_006260403.4 → XP_006260465.1  17-beta-hydroxysteroid dehydrogenase type 1 isoform X1

    UniProtKB/TrEMBL
    A0A151N962
    Conserved Domains (2) summary
    pfam00106
    Location:5 → 189
    adh_short; short chain dehydrogenase
    cl21454
    Location:4 → 260
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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