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TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102563482, updated on 8-May-2024

Summary

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Gene symbol
TAB1
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 1
Locus tag
Y1Q_0024071
See related
EnsemblRapid:ENSAMIG00015024248
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (99032216..99042193, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710370.1 (2967263..2976996, complement)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosome and complex I assembly factor AltMIEF1 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene uncharacterized LOC132250134 Neighboring gene synaptogyrin 1 Neighboring gene small nucleolar RNA U82P Neighboring gene ribosomal protein L3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    99032216..99042193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006262365.4 → XP_006262427.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A151NIG6
    Conserved Domains (1) summary
    pfam00481
    Location:69 → 334
    PP2C; Protein phosphatase 2C

  2. XM_059726387.1 → XP_059582370.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    Related
    ENSAMIP00015033476.1, ENSAMIT00015045983.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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