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TPRA1 transmembrane protein adipocyte associated 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102562081, updated on 8-May-2024

Summary

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Gene symbol
TPRA1
Gene description
transmembrane protein adipocyte associated 1
See related
EnsemblRapid:ENSAMIG00015006547
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 12 NC_081835.1 (18760192..18783733, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713410.1 (1158333..1181870)

Chromosome 12 - NC_081835.1Genomic Context describing neighboring genes Neighboring gene plexin A1 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 6 Neighboring gene minichromosome maintenance complex component 2 Neighboring gene podocalyxin like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein adipocyte-associated 1
Names
transmembrane protein adipocyte-associated 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081835.1 Reference rAllMis1 Primary Assembly

    Range
    18760192..18783733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059715938.1 → XP_059571921.1  transmembrane protein adipocyte-associated 1 isoform X2

  2. XM_019499722.2 → XP_019355267.1  transmembrane protein adipocyte-associated 1 isoform X1

  3. XM_006264421.4 → XP_006264483.1  transmembrane protein adipocyte-associated 1 isoform X1

    Conserved Domains (1) summary
    pfam10160
    Location:61 → 335
    Tmemb_40; Predicted membrane protein

  4. XM_014605755.3 → XP_014461241.1  transmembrane protein adipocyte-associated 1 isoform X1

    Conserved Domains (1) summary
    pfam10160
    Location:61 → 335
    Tmemb_40; Predicted membrane protein

  5. XM_019499721.2 → XP_019355266.1  transmembrane protein adipocyte-associated 1 isoform X1

    Related
    ENSAMIP00015008356.1, ENSAMIT00015011856.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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