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TRPM7 transient receptor potential cation channel subfamily M member 7 [ Vicugna pacos (alpaca) ]

Gene ID: 102545569, updated on 10-Mar-2024

Summary

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Gene symbol
TRPM7
Gene description
transient receptor potential cation channel subfamily M member 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_021988660.1 (8734859..8837474)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882786.1 (5891683..5993928)

NW_021988660.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 4 subunit epsilon 1 Neighboring gene signal peptide peptidase like 2A Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L13 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin specific peptidase 50

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic cation homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein tetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transient receptor potential cation channel subfamily M member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021988660.1 Reference VicPac3.1 Primary Assembly

    Range
    8734859..8837474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015242738.2 → XP_015098224.1  transient receptor potential cation channel subfamily M member 7

    UniProtKB/TrEMBL
    A0A6J0ANU9
    Conserved Domains (4) summary
    TIGR00870
    Location:722 → 1172
    trp; transient-receptor-potential calcium channel protein
    cd16971
    Location:1601 → 1839
    Alpha_kinase_ChaK1_TRMP7; Alpha-kinase domain of channel kinase 1, also called transient receptor potential cation channel subfamily M member 7
    pfam16519
    Location:1194 → 1249
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:106 → 371
    LSDAT_euk; SLOG in TRPM
Nucleotide Protein
Heading Accession and Version

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