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SMOX spermine oxidase [ Vicugna pacos (alpaca) ]

Gene ID: 102544779, updated on 10-Mar-2024

Summary

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Gene symbol
SMOX
Gene description
spermine oxidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_022038908.1 (2412330..2441106)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882770.1 (2454992..2484298)

NW_022038908.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 24 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene adrenoceptor alpha 1D Neighboring gene basic proline-rich protein-like Neighboring gene ferritin light chain pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyamine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermine oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_022038908.1 Reference VicPac3.1 Primary Assembly

    Range
    2412330..2441106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015241846.1 → XP_015097332.1  spermine oxidase isoform X3

    UniProtKB/TrEMBL
    A0A6J0AMJ3
    Conserved Domains (1) summary
    PLN02568
    Location:50 → 512
    PLN02568; polyamine oxidase

  2. XM_006207348.3 → XP_006207410.1  spermine oxidase isoform X1

    UniProtKB/TrEMBL
    A0A6I9IBB1
    Conserved Domains (1) summary
    PLN02568
    Location:50 → 578
    PLN02568; polyamine oxidase

  3. XM_006207349.3 → XP_006207411.1  spermine oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I9ID58
    Conserved Domains (1) summary
    PLN02568
    Location:50 → 548
    PLN02568; polyamine oxidase

RNA

  1. XR_004188480.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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