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COG2 component of oligomeric golgi complex 2 [ Vicugna pacos (alpaca) ]

Gene ID: 102543821, updated on 10-Mar-2024

Summary

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Gene symbol
COG2
Gene description
component of oligomeric golgi complex 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
19
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 11 Unlocalized Scaffold NW_021964173.1 (2801264..2844292, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882854.1 (2810645..2853789, complement)

NW_021964173.1Genomic Context describing neighboring genes Neighboring gene calpain 9 Neighboring gene angiotensinogen Neighboring gene piggyBac transposable element derived 5 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964173.1 Reference VicPac3.1 Primary Assembly

    Range
    2801264..2844292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031681464.1 → XP_031537324.1  LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 2

    UniProtKB/TrEMBL
    A0A6J3AU02
    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:601 → 727
    DUF3510; Domain of unknown function (DUF3510)
Nucleotide Protein
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