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DDX55 DEAD-box helicase 55 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102522530, updated on 10-Mar-2024

Summary

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Gene symbol
DDX55
Gene description
DEAD-box helicase 55
Locus tag
CB1_000348013
See related
EnsemblRapid:ENSCFEG00005012453
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 32
Exon count:
14
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 32 NC_045727.1 (1462274..1475450, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210524.1 (481000..494304)

Chromosome 32 - NC_045727.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIH subunit 3 Neighboring gene eukaryotic translation initiation factor 2B subunit alpha Neighboring gene transmembrane p24 trafficking protein 2 Neighboring gene Rab interacting lysosomal protein like 1 Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX55

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045727.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    1462274..1475450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032471722.1 → XP_032327613.1  ATP-dependent RNA helicase DDX55 isoform X3

    UniProtKB/TrEMBL
    A0A8B8SBL8
    Related
    ENSCFEP00005020812.1, ENSCFET00005023189.1
    Conserved Domains (1) summary
    COG0513
    Location:158 → 560
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]

  2. XM_014553762.2 → XP_014409248.2  ATP-dependent RNA helicase DDX55 isoform X2

    UniProtKB/TrEMBL
    A0A8B7K631, S9YPG0
    Conserved Domains (1) summary
    COG0513
    Location:2 → 471
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]

  3. XM_032471721.1 → XP_032327612.1  ATP-dependent RNA helicase DDX55 isoform X1

    UniProtKB/TrEMBL
    A0A8B8SE35, S9YPG0
    Related
    ENSCFEP00005020794.1, ENSCFET00005023156.1
    Conserved Domains (2) summary
    COG0513
    Location:2 → 517
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17960
    Location:20 → 224
    DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55

  4. XM_032471725.1 → XP_032327616.1  ATP-dependent RNA helicase DDX55 isoform X5

    UniProtKB/TrEMBL
    A0A8B8SBL5, S9YPG0
    Conserved Domains (2) summary
    COG0513
    Location:1 → 474
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17960
    Location:1 → 181
    DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55

  5. XM_032471724.1 → XP_032327615.1  ATP-dependent RNA helicase DDX55 isoform X4

    UniProtKB/TrEMBL
    A0A8B8SCS3
    Conserved Domains (3) summary
    cd18787
    Location:242 → 372
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17960
    Location:20 → 224
    DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55
    pfam13959
    Location:405 → 446
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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