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TCOF1 treacle ribosome biogenesis factor 1 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102511752, updated on 10-Mar-2024

Summary

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Gene symbol
TCOF1
Gene description
treacle ribosome biogenesis factor 1
Locus tag
CB1_000163029
See related
EnsemblRapid:ENSCFEG00005008133
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
27
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 3 NC_045698.1 (105997684..106033045)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210339.1 (1303269..1339270, complement)

Chromosome 3 - NC_045698.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin dependent protein kinase II alpha Neighboring gene arylsulfatase family member I Neighboring gene CD74 molecule Neighboring gene ribosomal protein S14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
treacle protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045698.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    105997684..106033045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032477102.1 → XP_032332993.1  treacle protein isoform X1

    UniProtKB/TrEMBL
    A0A8B8SS90, S9YX76
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:317 → 873
    Treacle; Treacher Collins syndrome protein Treacle

  2. XM_032477103.1 → XP_032332994.1  treacle protein isoform X1

    UniProtKB/TrEMBL
    A0A8B8SS90, S9YX76
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:317 → 873
    Treacle; Treacher Collins syndrome protein Treacle

  3. XM_032477105.1 → XP_032332996.1  treacle protein isoform X3

    UniProtKB/TrEMBL
    A0A8B8SS78, S9YX76
    Conserved Domains (3) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    PHA03247
    Location:753 → 1238
    PHA03247; large tegument protein UL36; Provisional
    pfam03546
    Location:317 → 873
    Treacle; Treacher Collins syndrome protein Treacle

  4. XM_032477104.1 → XP_032332995.1  treacle protein isoform X2

    UniProtKB/TrEMBL
    A0A8B8SSV7, S9YX76
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:317 → 873
    Treacle; Treacher Collins syndrome protein Treacle

  5. XM_032477107.1 → XP_032332998.1  treacle protein isoform X6

    UniProtKB/TrEMBL
    A0A8B8SS94, S9YX76
    Related
    ENSCFEP00005013655.1, ENSCFET00005015240.1
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:317 → 867
    Treacle; Treacher Collins syndrome protein Treacle

  6. XM_014567376.2 → XP_014422862.2  treacle protein isoform X4

    UniProtKB/TrEMBL
    A0A8B7KG37, S9YX76
    Related
    ENSCFEP00005013513.1, ENSCFET00005015081.1
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:317 → 843
    Treacle; Treacher Collins syndrome protein Treacle

  7. XM_032477113.1 → XP_032333004.1  treacle protein isoform X11

    UniProtKB/TrEMBL
    A0A8B8ST96, S9YX76
    Conserved Domains (3) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    PHA03247
    Location:753 → 1208
    PHA03247; large tegument protein UL36; Provisional
    pfam03546
    Location:317 → 843
    Treacle; Treacher Collins syndrome protein Treacle

  8. XM_032477106.1 → XP_032332997.1  treacle protein isoform X5

    UniProtKB/TrEMBL
    A0A8B8STY3, S9YX76
    Related
    ENSCFEP00005013549.1, ENSCFET00005015120.1
    Conserved Domains (3) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    PHA03247
    Location:688 → 1174
    PHA03247; large tegument protein UL36; Provisional
    pfam03546
    Location:317 → 808
    Treacle; Treacher Collins syndrome protein Treacle

  9. XM_032477111.1 → XP_032333002.1  treacle protein isoform X9

    UniProtKB/TrEMBL
    A0A8B8STY8, S9YX76
    Related
    ENSCFEP00005013602.1, ENSCFET00005015180.1
    Conserved Domains (3) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    PHA03247
    Location:603 → 1089
    PHA03247; large tegument protein UL36; Provisional
    pfam03546
    Location:317 → 810
    Treacle; Treacher Collins syndrome protein Treacle

  10. XM_032477112.1 → XP_032333003.1  treacle protein isoform X10

    UniProtKB/TrEMBL
    A0A8B8SS99
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:317 → 779
    Treacle; Treacher Collins syndrome protein Treacle

  11. XM_032477109.1 → XP_032333000.1  treacle protein isoform X7

    UniProtKB/TrEMBL
    A0A8B8SSW0, S9YX76
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:240 → 796
    Treacle; Treacher Collins syndrome protein Treacle

  12. XM_032477110.1 → XP_032333001.1  treacle protein isoform X8

    UniProtKB/TrEMBL
    A0A8B8SS83, S9YX76
    Related
    ENSCFEP00005013573.1, ENSCFET00005015148.1
    Conserved Domains (2) summary
    smart00667
    Location:6 → 37
    LisH; Lissencephaly type-1-like homology motif
    pfam03546
    Location:240 → 766
    Treacle; Treacher Collins syndrome protein Treacle
Nucleotide Protein
Heading Accession and Version

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