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SEC61A1 SEC61 translocon subunit alpha 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102490355, updated on 10-Mar-2024

Summary

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Gene symbol
SEC61A1
Gene description
SEC61 translocon subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006207352.1 (517943..534782)

NW_006207352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102480440 Neighboring gene kelch repeat and BTB domain containing 12 Neighboring gene RuvB like AAA ATPase 1 Neighboring gene eukaryotic elongation factor, selenocysteine-tRNA specific

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006207352 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signal sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec61 translocon complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec61 subunit alpha
Names
SEC61 translocon alpha 1 subunit
Sec61 alpha 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006207352.1 Reference TupChi_1.0

    Range
    517943..534782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006169832.3 → XP_006169894.1  protein transport protein Sec61 subunit alpha

    Conserved Domains (3) summary
    PTZ00219
    Location:223 → 668
    PTZ00219; Sec61 alpha subunit; Provisional
    pfam00344
    Location:272 → 655
    SecY; SecY translocase
    pfam10559
    Location:237 → 270
    Plug_translocon; Plug domain of Sec61p
Nucleotide Protein
Heading Accession and Version

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