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MTF1 metal regulatory transcription factor 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102475717, updated on 10-Mar-2024

Summary

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Gene symbol
MTF1
Gene description
metal regulatory transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006160122.1 (1508464..1558928, complement)

NW_006160122.1Genomic Context describing neighboring genes Neighboring gene mannosidase endo-alpha like Neighboring gene chromosome unknown C1orf122 homolog Neighboring gene yrdC N6-threonylcarbamoyltransferase domain containing Neighboring gene inositol polyphosphate-5-phosphatase B Neighboring gene splicing factor 3a subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006160122 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metal regulatory transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006160122.1 Reference TupChi_1.0

    Range
    1508464..1558928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006158586.3 → XP_006158648.1  metal regulatory transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    L9JC85
    Conserved Domains (3) summary
    sd00017
    Location:233 → 252
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:244 → 270
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:230 → 318
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_006158585.3 → XP_006158647.1  metal regulatory transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    L9JC85
    Conserved Domains (3) summary
    sd00017
    Location:233 → 252
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:244 → 270
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:230 → 318
    zf-C2H2_8; C2H2-type zinc ribbon

  3. XM_014591622.2 → XP_014447108.1  metal regulatory transcription factor 1 isoform X3

    Conserved Domains (4) summary
    COG5048
    Location:5 → 203
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:146 → 165
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:157 → 183
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:143 → 231
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
Heading Accession and Version

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