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HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102469718, updated on 10-Mar-2024

Summary

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Gene symbol
HMGCS2
Gene description
3-hydroxy-3-methylglutaryl-CoA synthase 2
Locus tag
TREES_T100022026
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006204105.1 (1292796..1322146)

NW_006204105.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene regenerating family member 4 Neighboring gene phosphoglycerate dehydrogenase Neighboring gene zinc finger protein 697

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006204105 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in farnesyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxymethylglutaryl-CoA synthase, mitochondrial
Names
Hydroxymethylglutaryl-CoA synthase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006204105.1 Reference TupChi_1.0

    Range
    1292796..1322146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006166294.3 → XP_006166356.1  hydroxymethylglutaryl-CoA synthase, mitochondrial

    UniProtKB/TrEMBL
    L8Y9N6
    Conserved Domains (3) summary
    TIGR01833
    Location:49 → 505
    HMG-CoA-S_euk; 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade
    pfam01154
    Location:52 → 222
    HMG_CoA_synt_N; Hydroxymethylglutaryl-coenzyme A synthase N terminal
    pfam08540
    Location:223 → 505
    HMG_CoA_synt_C; Hydroxymethylglutaryl-coenzyme A synthase C terminal
Nucleotide Protein
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