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SARDH sarcosine dehydrogenase [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102455800, updated on 10-Mar-2024

Summary

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Gene symbol
SARDH
Gene description
sarcosine dehydrogenase
See related
Ensembl:ENSPSIG00000010509
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005855427.1 (694688..818237, complement)

NW_005855427.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 163 member B Neighboring gene uncharacterized LOC112545918 Neighboring gene dopamine beta-hydroxylase Neighboring gene vav guanine nucleotide exchange factor 2 Neighboring gene BRD3 opposite strand

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005855427 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcosine dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005855427.1 Reference PelSin_1.0 Primary Assembly

    Range
    694688..818237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006123800.3 → XP_006123862.1  sarcosine dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    K7FV59
    Related
    ENSPSIP00000011919.1, ENSPSIT00000011976.1
    Conserved Domains (5) summary
    COG0404
    Location:422 → 859
    GcvT; Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]
    COG0665
    Location:31 → 390
    DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]
    pfam01571
    Location:432 → 741
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:750 → 843
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
    pfam16350
    Location:373 → 427
    FAO_M; FAD dependent oxidoreductase central domain
Nucleotide Protein
Heading Accession and Version

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