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BRD4 bromodomain containing 4 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102455310, updated on 10-Mar-2024

Summary

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Gene symbol
BRD4
Gene description
bromodomain containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854350.1 (309552..529707, complement)

NW_005854350.1Genomic Context describing neighboring genes Neighboring gene notch receptor 3 Neighboring gene epoxide hydrolase 3-like Neighboring gene epoxide hydrolase 3 Neighboring gene uncharacterized LOC102455132 Neighboring gene uncharacterized LOC102455545 Neighboring gene A-kinase anchoring protein 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854350 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysine-acetylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: bromodomain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854350.1 Reference PelSin_1.0 Primary Assembly

    Range
    309552..529707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006119951.3 → XP_006120013.1  LOW QUALITY PROTEIN: bromodomain-containing protein 4

    Conserved Domains (4) summary
    cd05497
    Location:58 → 164
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:352 → 453
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17035
    Location:609 → 673
    BET; Bromodomain extra-terminal - transcription regulation
    pfam17105
    Location:1280 → 1322
    BRD4_CDT; C-terminal domain of bromodomain protein 4
Nucleotide Protein
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