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MYO5B myosin VB [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102455112, updated on 10-Mar-2024

Summary

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Gene symbol
MYO5B
Gene description
myosin VB
See related
Ensembl:ENSPSIG00000005153
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See MYO5B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
41
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005859052.1 (1797438..2131857)

NW_005859052.1Genomic Context describing neighboring genes Neighboring gene tetraspanin-36-like Neighboring gene cilia and flagella associated protein 53 Neighboring gene uncharacterized LOC102454940 Neighboring gene small Cajal body-specific RNA 18 Neighboring gene acetyl-CoA acyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005859052 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: unconventional myosin-Vb

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005859052.1 Reference PelSin_1.0 Primary Assembly

    Range
    1797438..2131857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014580417.2 → XP_014435903.1  LOW QUALITY PROTEIN: unconventional myosin-Vb

    UniProtKB/TrEMBL
    K7FBY9
    Related
    ENSPSIP00000005549.1, ENSPSIT00000005582.1
    Conserved Domains (8) summary
    smart00242
    Location:64 → 760
    MYSc; Myosin. Large ATPases
    COG3352
    Location:1141 → 1264
    FlaC; Archaellum component FlaC [Cell motility]
    cd15477
    Location:1468 → 1840
    Myo5b_CBD; Cargo binding domain of myosin 5b
    cd01380
    Location:83 → 749
    MYSc_Myo5; class V myosin, motor domain
    pfam02736
    Location:11 → 36
    Myosin_N; Myosin N-terminal SH3-like domain
    pfam14662
    Location:912 → 1079
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    cl20817
    Location:1328 → 1371
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl23720
    Location:967 → 1066
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

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