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CLK1 CDC like kinase 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102453889, updated on 10-Mar-2024

Summary

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Gene symbol
CLK1
Gene description
CDC like kinase 1
See related
Ensembl:ENSPSIG00000003762
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853697.1 (6753158..6768063, complement)

NW_005853697.1Genomic Context describing neighboring genes Neighboring gene aldehyde oxidase 3 Neighboring gene TBC1 domain family member 24 pseudogene Neighboring gene basic leucine zipper and W2 domains 1 Neighboring gene peptidylprolyl isomerase like 3 Neighboring gene NGG1 interacting factor 3 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853697 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity protein kinase CLK1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853697.1 Reference PelSin_1.0 Primary Assembly

    Range
    6753158..6768063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014570910.2 → XP_014426396.1  dual specificity protein kinase CLK1 isoform X1

    Conserved Domains (2) summary
    smart00220
    Location:1 → 251
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:1 → 251
    PKc_like; Protein Kinases, catalytic domain

  2. XM_014570912.2 → XP_014426398.1  dual specificity protein kinase CLK1 isoform X2

    UniProtKB/TrEMBL
    K7F7I1
    Related
    ENSPSIP00000003991.1, ENSPSIT00000004013.1
    Conserved Domains (2) summary
    smart00220
    Location:153 → 469
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14213
    Location:140 → 469
    PKc_CLK1_4; Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4

  3. XM_014570911.2 → XP_014426397.1  dual specificity protein kinase CLK1 isoform X1

    Conserved Domains (2) summary
    smart00220
    Location:1 → 251
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:1 → 251
    PKc_like; Protein Kinases, catalytic domain

  4. XM_014570909.2 → XP_014426395.1  dual specificity protein kinase CLK1 isoform X1

    Conserved Domains (2) summary
    smart00220
    Location:1 → 251
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:1 → 251
    PKc_like; Protein Kinases, catalytic domain

  5. XM_014570908.2 → XP_014426394.1  dual specificity protein kinase CLK1 isoform X1

    Conserved Domains (2) summary
    smart00220
    Location:1 → 251
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:1 → 251
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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