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ODF2L outer dense fiber of sperm tails 2 like [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102446920, updated on 10-Mar-2024

Summary

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Gene symbol
ODF2L
Gene description
outer dense fiber of sperm tails 2 like
See related
Ensembl:ENSPSIG00000011027
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See ODF2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854395.1 (1050046..1107568)

NW_005854395.1Genomic Context describing neighboring genes Neighboring gene calcium-activated chloride channel regulator 1-like Neighboring gene calcium-activated chloride channel regulator 1-like Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene zinc finger HIT-type containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854395 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
outer dense fiber protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854395.1 Reference PelSin_1.0 Primary Assembly

    Range
    1050046..1107568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006120259.3 → XP_006120321.1  outer dense fiber protein 2-like isoform X3

    Conserved Domains (1) summary
    pfam08172
    Location:240 → 355
    CASP_C; CASP C terminal

  2. XM_006120257.3 → XP_006120319.1  outer dense fiber protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006120319.1

    Conserved Domains (1) summary
    cl25732
    Location:148 → 500
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_006120255.3 → XP_006120317.1  outer dense fiber protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006120317.1

    Conserved Domains (1) summary
    cl25732
    Location:148 → 500
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_006120258.3 → XP_006120320.1  outer dense fiber protein 2-like isoform X2

    UniProtKB/TrEMBL
    K7FW90
    Related
    ENSPSIP00000012300.1, ENSPSIT00000012359.1
    Conserved Domains (1) summary
    pfam08172
    Location:302 → 462
    CASP_C; CASP C terminal

  5. XM_025183173.1 → XP_025038958.1  outer dense fiber protein 2-like isoform X1

    Conserved Domains (1) summary
    cl25732
    Location:148 → 500
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_006120256.3 → XP_006120318.1  outer dense fiber protein 2-like isoform X1

    See identical proteins and their annotated locations for XP_006120318.1

    Conserved Domains (1) summary
    cl25732
    Location:148 → 500
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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