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USP47 ubiquitin specific peptidase 47 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102434917, updated on 30-Mar-2024

Summary

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Gene symbol
USP47
Gene description
ubiquitin specific peptidase 47
See related
Ensembl:ENSMLUG00000023786
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871109.1 (2619865..2716133, complement)

NW_005871109.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA28 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2 Neighboring gene dickkopf WNT signaling pathway inhibitor 3 Neighboring gene uncharacterized LOC106697314 Neighboring gene ferritin light chain pseudogene Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871109 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871109.1 Reference Myoluc2.0

    Range
    2619865..2716133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006089607.3 → XP_006089669.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X6

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (2) summary
    cd02659
    Location:86 → 466
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:87 → 461
    UCH; Ubiquitin carboxyl-terminal hydrolase

  2. XM_023754532.1 → XP_023610300.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X4

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (1) summary
    cd02659
    Location:181 → 517
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  3. XM_023754531.1 → XP_023610299.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X3

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (1) summary
    cd02659
    Location:181 → 561
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  4. XM_023754530.1 → XP_023610298.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X1

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (1) summary
    cd02659
    Location:181 → 561
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  5. XM_023754534.1 → XP_023610302.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X7

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (1) summary
    cd02659
    Location:70 → 450
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  6. XM_023754533.1 → XP_023610301.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X5

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (1) summary
    cd02659
    Location:107 → 487
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  7. XM_014456603.2 → XP_014312089.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X2

    UniProtKB/TrEMBL
    G1Q3Y1
    Related
    ENSMLUP00000018414.1, ENSMLUT00000031055.1
    Conserved Domains (2) summary
    cd02659
    Location:160 → 540
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:161 → 535
    UCH; Ubiquitin carboxyl-terminal hydrolase

  8. XM_014456604.2 → XP_014312090.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X8

    UniProtKB/TrEMBL
    G1Q3Y1
    Conserved Domains (2) summary
    cd02659
    Location:49 → 429
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:50 → 424
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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