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RPRD2 regulation of nuclear pre-mRNA domain containing 2 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102434730, updated on 30-Mar-2024

Summary

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Gene symbol
RPRD2
Gene description
regulation of nuclear pre-mRNA domain containing 2
See related
Ensembl:ENSMLUG00000013112
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871199.1 (1427027..1491984)

NW_005871199.1Genomic Context describing neighboring genes Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp3-like Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp3-like Neighboring gene U4 spliceosomal RNA Neighboring gene threonyl-tRNA synthetase 2, mitochondrial Neighboring gene extracellular matrix protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871199 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II C-terminal domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, holoenzyme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulation of nuclear pre-mRNA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871199.1 Reference Myoluc2.0

    Range
    1427027..1491984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023759160.1 → XP_023614928.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X2

    Conserved Domains (4) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA
    cl00341
    Location:652 → 741
    IGPD; Imidazoleglycerol-phosphate dehydratase
    cl25496
    Location:316 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:142 → 318
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_006095204.3 → XP_006095266.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X3

    Conserved Domains (1) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  3. XM_023759161.1 → XP_023614929.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X4

    Conserved Domains (4) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA
    cl00341
    Location:653 → 742
    IGPD; Imidazoleglycerol-phosphate dehydratase
    cl25496
    Location:319 → 674
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:142 → 318
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_006095206.3 → XP_006095268.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X6

    Conserved Domains (1) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  5. XM_006095202.3 → XP_006095264.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    G1PM22
    Related
    ENSMLUP00000011932.2, ENSMLUT00000013117.2
    Conserved Domains (1) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  6. XM_023759162.1 → XP_023614930.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X5

    Conserved Domains (4) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA
    cl00341
    Location:653 → 742
    IGPD; Imidazoleglycerol-phosphate dehydratase
    cl25496
    Location:319 → 674
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:142 → 318
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
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