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CDC5L cell division cycle 5 like [ Myotis lucifugus (little brown bat) ]

Gene ID: 102421106, updated on 30-Mar-2024

Summary

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Gene symbol
CDC5L
Gene description
cell division cycle 5 like
See related
Ensembl:ENSMLUG00000012803
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See CDC5L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871289.1 (270303..319107)

NW_005871289.1Genomic Context describing neighboring genes Neighboring gene t-complex-associated-testis-expressed 1 Neighboring gene alanyl-tRNA synthetase 2, mitochondrial Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene runt-related transcription factor 2-like Neighboring gene RUNX family transcription factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871289 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871289.1 Reference Myoluc2.0

    Range
    270303..319107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006098579.3 → XP_006098641.1  cell division cycle 5-like protein isoform X1

    UniProtKB/TrEMBL
    G1PLC9
    Related
    ENSMLUP00000011657.2, ENSMLUT00000012811.2
    Conserved Domains (4) summary
    smart00717
    Location:8 → 56
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11659
    Location:56 → 107
    SANT_CDC5_II; SANT/myb-like DNA-binding domain of Cell Division Cycle 5-Like Protein repeat II
    pfam11831
    Location:404 → 655
    Myb_Cef; pre-mRNA splicing factor component
    pfam13921
    Location:11 → 71
    Myb_DNA-bind_6; Myb-like DNA-binding domain

  2. XM_023762300.1 → XP_023618068.1  cell division cycle 5-like protein isoform X3

    UniProtKB/TrEMBL
    G1PLC9
    Conserved Domains (2) summary
    COG5147
    Location:6 → 303
    REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
    pfam11831
    Location:404 → 631
    Myb_Cef; pre-mRNA splicing factor component

  3. XM_023762299.1 → XP_023618067.1  cell division cycle 5-like protein isoform X2

    UniProtKB/TrEMBL
    G1PLC9
    Conserved Domains (2) summary
    COG5147
    Location:6 → 303
    REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
    pfam11831
    Location:404 → 655
    Myb_Cef; pre-mRNA splicing factor component

  4. XM_023762301.1 → XP_023618069.1  cell division cycle 5-like protein isoform X4

    UniProtKB/TrEMBL
    G1PLC9
    Conserved Domains (3) summary
    pfam11831
    Location:327 → 578
    Myb_Cef; pre-mRNA splicing factor component
    cl25732
    Location:525 → 725
    SMC_N; RecF/RecN/SMC N terminal domain
    cl28544
    Location:2 → 226
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Nucleotide Protein
Heading Accession and Version

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