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SLC38A3 solute carrier family 38 member 3 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102413343, updated on 10-Mar-2024

Summary

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Gene symbol
SLC38A3
Gene description
solute carrier family 38 member 3
See related
EnsemblRapid:ENSBALG00030033229
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
16
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 21 NC_059177.1 (50032670..50047091, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 21 NC_058363.1 (49736214..49750641, complement)

Chromosome 21 - NC_059177.1Genomic Context describing neighboring genes Neighboring gene G protein subunit alpha i2 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene G protein subunit alpha transducin 1 Neighboring gene semaphorin 3F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-asparagine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-glutamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-histidine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in asparagine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glutamine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in histidine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium-coupled neutral amino acid transporter 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059177.1 Reference NDDB_SH_1 Primary Assembly

    Range
    50032670..50047091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006053292.4 → XP_006053354.1  sodium-coupled neutral amino acid transporter 3 isoform X1

    Related
    ENSBALP00030061330.1, ENSBALT00030091964.1
    Conserved Domains (2) summary
    COG0814
    Location:64 → 486
    SdaC; Amino acid permease [Amino acid transport and metabolism]
    cl00456
    Location:64 → 491
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_025272078.3 → XP_025127863.1  sodium-coupled neutral amino acid transporter 3 isoform X2

    Conserved Domains (1) summary
    cl00456
    Location:1 → 422
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version

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