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SYN2 synapsin II [ Bubalus bubalis (water buffalo) ]

Gene ID: 102401489, updated on 10-Mar-2024

Summary

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Gene symbol
SYN2
Gene description
synapsin II
See related
EnsemblRapid:ENSBALG00030025177
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
14
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 21 NC_059177.1 (56762660..56945138, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 21 NC_058363.1 (56477831..56659181, complement)

Chromosome 21 - NC_059177.1Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator activated receptor gamma Neighboring gene uncharacterized LOC112581204 Neighboring gene uncharacterized LOC123331042 Neighboring gene TIMP metallopeptidase inhibitor 4 Neighboring gene 40S ribosomal protein SA Neighboring gene phosphatidate cytidylyltransferase, mitochondrial-like Neighboring gene rabenosyn, RAB effector Neighboring gene mitochondrial ribosomal protein S25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synapsin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059177.1 Reference NDDB_SH_1 Primary Assembly

    Range
    56762660..56945138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025272545.3 → XP_025128330.1  synapsin-2 isoform X2

    Related
    ENSBALP00030047604.1, ENSBALT00030070526.1
    Conserved Domains (3) summary
    pfam02078
    Location:119 → 216
    Synapsin; N-terminal domain
    pfam10581
    Location:2 → 33
    Synapsin_N; Synapsin N-terminal
    cl17255
    Location:218 → 420
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

  2. XM_025272544.3 → XP_025128329.1  synapsin-2 isoform X1

    Related
    ENSBALP00030047575.1, ENSBALT00030070478.1
    Conserved Domains (3) summary
    pfam02078
    Location:119 → 216
    Synapsin; N-terminal domain
    pfam10581
    Location:2 → 33
    Synapsin_N; Synapsin N-terminal
    cl17255
    Location:218 → 420
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain
Nucleotide Protein
Heading Accession and Version

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