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MYOCD myocardin [ Bubalus bubalis (water buffalo) ]

Gene ID: 102396047, updated on 10-Mar-2024

Summary

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Gene symbol
MYOCD
Gene description
myocardin
See related
EnsemblRapid:ENSBALG00030009570
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See MYOCD in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (31910388..32000760, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (32006644..32087311, complement)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123465564 Neighboring gene uncharacterized LOC123465565 Neighboring gene elaC ribonuclease Z 2 Neighboring gene Rho GTPase activating protein 44 Neighboring gene uncharacterized LOC112583719 Neighboring gene uncharacterized LOC123332381

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smooth muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myocardin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    31910388..32000760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044939247.2 → XP_044795182.2  myocardin isoform X4

  2. XM_044939246.2 → XP_044795181.2  myocardin isoform X4

    Related
    ENSBALP00030017743.1, ENSBALT00030026643.1

  3. XM_044939245.2 → XP_044795180.2  myocardin isoform X2

  4. XM_006054524.4 → XP_006054586.3  myocardin isoform X3

    Related
    ENSBALP00030017803.1, ENSBALT00030026742.1

  5. XM_006054523.4 → XP_006054585.3  myocardin isoform X1

    Related
    ENSBALP00030017788.1, ENSBALT00030026722.1

  6. XM_006054525.4 → XP_006054587.3  myocardin isoform X4

  7. XM_025280529.3 → XP_025136314.3  myocardin isoform X5

Nucleotide Protein
Heading Accession and Version

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