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CROT carnitine O-octanoyltransferase [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102386610, updated on 10-Mar-2024

Summary

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Gene symbol
CROT
Gene description
carnitine O-octanoyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842525.1 (982493..1022344)

NW_005842525.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P/MRP subunit p38 Neighboring gene acyl-CoA binding domain containing 7 Neighboring gene oleoyl-ACP hydrolase Neighboring gene phosphatidylcholine translocator ABCB4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842525 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-octanoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal carnitine O-octanoyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842525.1 Reference ASM45574v1 Primary Assembly

    Range
    982493..1022344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006031702.3 → XP_006031764.1  peroxisomal carnitine O-octanoyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1U7RZ08
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 603
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  2. XM_025213366.1 → XP_025069151.1  peroxisomal carnitine O-octanoyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3Q0HAQ4
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 566
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
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